Output 3D arrays for 3D visialization. More...

Data Types
interface	coordf

type	diag3d_parameters

interface	get_field_func

Functions/Subroutines
subroutine, public	init3ddiagnostics (parameters)

subroutine	create_mesh_pixie ()

subroutine	create_mesh_xdmf ()

subroutine, public	get3dmeshgrid (sgrid_ptr, chigrid_ptr, phigrid_ptr)

subroutine, public	get3dmeshinfo (zdsgrid, zdchigrid, zdphigrid, zsmin, zchimin, zphimin, zsbin, zchibin, zphibin, zlocalgrid)

subroutine, public	write3d (out_field, ztime, field_array_3d, field_function_ptr, filename, lclose_file, filename_suffix)

subroutine	get_3d_field_pixie (get_field)

subroutine	get_3d_field_xdmf (get_field)

subroutine	write_pixie (file_3d, ztime, fieldname, ljoinfields, ljoinsteps, lfclose)

subroutine	write_pixie_grid ()

subroutine	write_manyfiles_h5 (file_3d, fieldname)

subroutine	write_manyfiles_xmf (filename, fieldname)

subroutine	write_onefile_h5 (file_3d, ztime, fieldname)

subroutine	write_onefile_xmf (filename, ztime, dataname, fieldname)

subroutine	set_3d_parameters (param3d)

subroutine	write_3d_parameters ()

subroutine	set_3d_grid ()

subroutine	check_if_local (drank)

subroutine, public	checkout3dfile (out_field)

Variables
integer, parameter	dp = selected_real_kind(15, 307)

real(kind=dp), parameter	pi = 3.141592653589793238462643383279502884197_dp

real(kind=dp), parameter	phi_up_default = 6.283185307179586476925286766559005768394_dp

integer, parameter	fid_xmf = 30

logical, parameter	use_h5links = .false.

character(len=2), save	mesh_type

character, save	data_type

character(len=16)	output_format

character(len=4)	output_format_type

integer, dimension(3), target, save	mesh_size

double precision, dimension(2), target, save	slim

double precision, dimension(2), target, save	chilim

double precision, dimension(2), target, save	philim

double precision, dimension(:), allocatable, target, save	sgrid_loc

double precision, dimension(:), allocatable, target, save	chigrid_loc

double precision, dimension(:), allocatable, target, save	phigrid_loc

double precision, target, save	dsgrid

double precision, target, save	dchigrid

double precision, target, save	dphigrid

double precision, dimension(:), pointer, save	field_out_ptr

double precision, dimension(:), allocatable, target, save	field_out

double precision, dimension(:,:,:), pointer, save	field_out_3d_ptr

double precision, dimension(:,:,:), allocatable, target, save	field_out_3d

double precision, dimension(:), allocatable, save	xmesh_loc

double precision, dimension(:), allocatable, save	zmesh_loc

double precision, dimension(:), allocatable, save	ymesh_loc

double precision, dimension(:,:,:), allocatable, save	xmesh_loc_3d

double precision, dimension(:,:,:), allocatable, save	zmesh_loc_3d

double precision, dimension(:,:,:), allocatable, save	ymesh_loc_3d

logical, save	local_grid

logical, save	forcelocal = .false.

integer, target, save	nphip

integer, save	pshift

integer, save	me_loc

integer, save	comm_loc

integer, save	nvp_loc

logical, save	lverbose

logical, save	me_active = .true.

procedure(coordf), pointer, save	get_coords

Detailed Description

Output 3D arrays for 3D visialization.

HDF5 based formats: PIXIE and XDMF

Author: P. Angelino; T. M. Tran

Function/Subroutine Documentation

◆ check_if_local()

subroutine vis3d::check_if_local ( integer, intent(out) drank )

private

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◆ checkout3dfile()

subroutine, public vis3d::checkout3dfile ( character(*), intent(in) out_field )

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◆ create_mesh_pixie()

subroutine vis3d::create_mesh_pixie

private

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◆ create_mesh_xdmf()

subroutine vis3d::create_mesh_xdmf

private

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◆ get3dmeshgrid()

subroutine, public vis3d::get3dmeshgrid	(	double precision, dimension(:), intent(out), pointer	sgrid_ptr,
		double precision, dimension(:), intent(out), pointer	chigrid_ptr,
		double precision, dimension(:), intent(out), pointer	phigrid_ptr
	)

◆ get3dmeshinfo()

subroutine, public vis3d::get3dmeshinfo	(	double precision, intent(out), optional	zdsgrid,
		double precision, intent(out), optional	zdchigrid,
		double precision, intent(out), optional	zdphigrid,
		double precision, intent(out), optional	zsmin,
		double precision, intent(out), optional	zchimin,
		double precision, intent(out), optional	zphimin,
		integer, intent(out), optional	zsbin,
		integer, intent(out), optional	zchibin,
		integer, intent(out), optional	zphibin,
		logical, intent(out), optional	zlocalgrid
	)

◆ get_3d_field_pixie()

subroutine vis3d::get_3d_field_pixie ( procedure(get_field_func), optional, pointer get_field )

private

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◆ get_3d_field_xdmf()

subroutine vis3d::get_3d_field_xdmf ( procedure(get_field_func), optional, pointer get_field )

private

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◆ init3ddiagnostics()

subroutine, public vis3d::init3ddiagnostics ( type(diag3d_parameters), intent(in) parameters )

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◆ set_3d_grid()

subroutine vis3d::set_3d_grid

private

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◆ set_3d_parameters()

subroutine vis3d::set_3d_parameters ( type(diag3d_parameters), intent(in) param3d )

private

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◆ write3d()

subroutine, public vis3d::write3d	(	character(*), intent(in)	out_field,
		integer, intent(in)	ztime,
		double precision, dimension(:,:,:), intent(in), optional, target	field_array_3d,
		procedure(get_field_func), optional, pointer	field_function_ptr,
		character(len=128), intent(out), optional	filename,
		logical, intent(in), optional	lclose_file,
		character(len=128), intent(in), optional	filename_suffix
	)

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◆ write_3d_parameters()

subroutine vis3d::write_3d_parameters

private

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◆ write_manyfiles_h5()

subroutine vis3d::write_manyfiles_h5	(	character(*), intent(in)	file_3d,
		character(*), intent(in)	fieldname
	)

private

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◆ write_manyfiles_xmf()

subroutine vis3d::write_manyfiles_xmf	(	character(*), intent(in)	filename,
		character(*), intent(in)	fieldname
	)

private

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◆ write_onefile_h5()

subroutine vis3d::write_onefile_h5	(	character(*), intent(in)	file_3d,
		integer, intent(in)	ztime,
		character(*), intent(in)	fieldname
	)

private

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◆ write_onefile_xmf()

subroutine vis3d::write_onefile_xmf	(	character(*), intent(in)	filename,
		integer, intent(in)	ztime,
		character(*), intent(in)	dataname,
		character(*), intent(in)	fieldname
	)

private

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◆ write_pixie()

subroutine vis3d::write_pixie	(	character(*), intent(in)	file_3d,
		integer, intent(in), optional	ztime,
		character(*), intent(in), optional	fieldname,
		logical, intent(in), optional	ljoinfields,
		logical, intent(in), optional	ljoinsteps,
		logical, intent(in), optional	lfclose
	)

private

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◆ write_pixie_grid()

subroutine vis3d::write_pixie_grid

private

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Variable Documentation

◆ chigrid_loc

double precision, dimension(:), allocatable, target, save vis3d::chigrid_loc

private

◆ chilim

double precision, dimension(2), target, save vis3d::chilim

private

◆ comm_loc

integer, save vis3d::comm_loc

private

◆ data_type

character, save vis3d::data_type

private

◆ dchigrid

double precision, target, save vis3d::dchigrid

private

◆ dp

integer, parameter vis3d::dp = selected_real_kind(15, 307)

private

◆ dphigrid

double precision, target, save vis3d::dphigrid

private

◆ dsgrid

double precision, target, save vis3d::dsgrid

private

◆ fid_xmf

integer, parameter vis3d::fid_xmf = 30

private

◆ field_out

double precision, dimension(:), allocatable, target, save vis3d::field_out

private

◆ field_out_3d

double precision, dimension(:,:,:), allocatable, target, save vis3d::field_out_3d

private

◆ field_out_3d_ptr

double precision, dimension(:,:,:), pointer, save vis3d::field_out_3d_ptr

private

◆ field_out_ptr

double precision, dimension(:), pointer, save vis3d::field_out_ptr

private

◆ forcelocal

logical, save vis3d::forcelocal = .false.

private

◆ get_coords

procedure(coordf), pointer, save vis3d::get_coords

private

◆ local_grid

logical, save vis3d::local_grid

private

◆ lverbose

logical, save vis3d::lverbose

private

◆ me_active

logical, save vis3d::me_active = .true.

private

◆ me_loc

integer, save vis3d::me_loc

private

◆ mesh_size

integer, dimension(3), target, save vis3d::mesh_size

private

◆ mesh_type

character(len=2), save vis3d::mesh_type

private

◆ nphip

integer, target, save vis3d::nphip

private

◆ nvp_loc

integer, save vis3d::nvp_loc

private

◆ output_format

character(len=16) vis3d::output_format

private

◆ output_format_type

character(len=4) vis3d::output_format_type

private

◆ phi_up_default

real(kind=dp), parameter vis3d::phi_up_default = 6.283185307179586476925286766559005768394_dp

private

◆ phigrid_loc

double precision, dimension(:), allocatable, target, save vis3d::phigrid_loc

private

◆ philim

double precision, dimension(2), target, save vis3d::philim

private

◆ pi

real(kind=dp), parameter vis3d::pi = 3.141592653589793238462643383279502884197_dp

private

◆ pshift

integer, save vis3d::pshift

private

◆ sgrid_loc

double precision, dimension(:), allocatable, target, save vis3d::sgrid_loc

private

◆ slim

double precision, dimension(2), target, save vis3d::slim

private

◆ use_h5links

logical, parameter vis3d::use_h5links = .false.

private

◆ xmesh_loc

double precision, dimension(:), allocatable, save vis3d::xmesh_loc

private

◆ xmesh_loc_3d

double precision, dimension(:,:,:), allocatable, save vis3d::xmesh_loc_3d

private

◆ ymesh_loc

double precision, dimension(:), allocatable, save vis3d::ymesh_loc

private

◆ ymesh_loc_3d

double precision, dimension(:,:,:), allocatable, save vis3d::ymesh_loc_3d

private

◆ zmesh_loc

double precision, dimension(:), allocatable, save vis3d::zmesh_loc

private

◆ zmesh_loc_3d

double precision, dimension(:,:,:), allocatable, save vis3d::zmesh_loc_3d

private

Data Types

Functions/Subroutines

Variables

Detailed Description

Function/Subroutine Documentation

◆ check_if_local()

◆ checkout3dfile()

◆ create_mesh_pixie()

◆ create_mesh_xdmf()

◆ get3dmeshgrid()

◆ get3dmeshinfo()

◆ get_3d_field_pixie()

◆ get_3d_field_xdmf()

◆ init3ddiagnostics()

◆ set_3d_grid()

◆ set_3d_parameters()

◆ write3d()

◆ write_3d_parameters()

◆ write_manyfiles_h5()

◆ write_manyfiles_xmf()

◆ write_onefile_h5()

◆ write_onefile_xmf()

◆ write_pixie()

◆ write_pixie_grid()

Variable Documentation

◆ chigrid_loc

◆ chilim

◆ comm_loc

◆ data_type

◆ dchigrid

◆ dp

◆ dphigrid

◆ dsgrid

◆ fid_xmf

◆ field_out

◆ field_out_3d

◆ field_out_3d_ptr

◆ field_out_ptr

◆ forcelocal

◆ get_coords

◆ local_grid

◆ lverbose

◆ me_active

◆ me_loc

◆ mesh_size

◆ mesh_type

◆ nphip

◆ nvp_loc

◆ output_format

◆ output_format_type

◆ phi_up_default

◆ phigrid_loc

◆ philim

◆ pi

◆ pshift

◆ sgrid_loc

◆ slim

◆ use_h5links

◆ xmesh_loc

◆ xmesh_loc_3d

◆ ymesh_loc

◆ ymesh_loc_3d

◆ zmesh_loc

◆ zmesh_loc_3d