control_all Module Reference

Functions/Subroutines
subroutine, public	control
subroutine	initialize_all_modules (datn)
subroutine	date (str)
	Print the run date.
subroutine	print_run_label
	Label the run with the git commit hash and modified files since last commit.
subroutine	annular_label
subroutine	run_file_check (datn)
	Check if mystop and datn exist else create.
subroutine	create_data_directory
	Create data directory for the checkpoints.
subroutine	write_checkpoint
	Write files necessary for checkpoint.
subroutine	summarize_run
subroutine	create_hdf5_file
	Create the result file.
subroutine	create_parallel_hdf5_file
	Create the parallel result file (across subdomains).
subroutine	create_hdf5_testpart_file
	Create the trajectory file.
subroutine	open_hdf5_file
subroutine	open_parallel_hdf5_file
subroutine	open_hdf5_testpart_file
subroutine	close_hdf5_files
subroutine	copy_hdf5_to_main_directory (datn)
	Copy {orb5_res{,_parallel},matrix}.h5 file from dat{0,1} to main directory to avoid problems in case of crash.
subroutine	initialize_run_counter
	Create run counter.
subroutine	increment_run_counter
	Increment run counter.
subroutine	broadcast_file_related_variables (datn)
	Broadcast a couple variables computed by master.
subroutine	store_species_info
	Store information about species.
subroutine	store_input_file
	Store the input file in the current directory in the result file.
subroutine	store_commit_hash
	Store the Git commit hash, modified files and.
subroutine, public	check_mpi_types
subroutine, public	parse_program_arguments (nl_input_path, input_path)
	Parse program arguments to extract options input file name Arguments beginning with "--" are treated as options, and the rest is treated as input file name.
subroutine	restart_end_time

Function/Subroutine Documentation

annular_label()

subroutine control_all::annular_label

private

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broadcast_file_related_variables()

subroutine control_all::broadcast_file_related_variables ( integer, intent(inout) datn )

private

Broadcast a couple variables computed by master.

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check_mpi_types()

subroutine, public control_all::check_mpi_types

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close_hdf5_files()

subroutine control_all::close_hdf5_files

private

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control()

subroutine, public control_all::control

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copy_hdf5_to_main_directory()

subroutine control_all::copy_hdf5_to_main_directory ( integer, intent(in) datn )

private

Copy {orb5_res{,_parallel},matrix}.h5 file from dat{0,1} to main directory to avoid problems in case of crash.

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create_data_directory()

subroutine control_all::create_data_directory

private

Create data directory for the checkpoints.

Author

Emmanuel Lanti

Date

05/2017

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create_hdf5_file()

subroutine control_all::create_hdf5_file

private

Create the result file.

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create_hdf5_testpart_file()

subroutine control_all::create_hdf5_testpart_file

private

Create the trajectory file.

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create_parallel_hdf5_file()

subroutine control_all::create_parallel_hdf5_file

private

Create the parallel result file (across subdomains).

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date()

subroutine control_all::date ( character(len=*), intent(in) str )

private

Print the run date.

Parameters

[in]

str

String to be printed before the date

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increment_run_counter()

subroutine control_all::increment_run_counter

private

Increment run counter.

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initialize_all_modules()

subroutine control_all::initialize_all_modules ( integer, intent(in) datn )

private

Todo

decide where best to place - can it be moved to part.F90 area? ALS

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initialize_run_counter()

subroutine control_all::initialize_run_counter

private

Create run counter.

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open_hdf5_file()

subroutine control_all::open_hdf5_file

private

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open_hdf5_testpart_file()

subroutine control_all::open_hdf5_testpart_file

private

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open_parallel_hdf5_file()

subroutine control_all::open_parallel_hdf5_file

private

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parse_program_arguments()

subroutine, public control_all::parse_program_arguments	(	logical, intent(inout)	nl_input_path,
		character(len=*), intent(inout)	input_path )

Parse program arguments to extract options input file name Arguments beginning with "--" are treated as options, and the rest is treated as input file name.

Author

N. Ohana, E. Lanti

Date

09/2017

Parameters

[in,out]	nl_input_path	If an input path is given in argument
[in,out]	input_path	Path to input

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print_run_label()

subroutine control_all::print_run_label

private

Label the run with the git commit hash and modified files since last commit.

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restart_end_time()

subroutine control_all::restart_end_time

private

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run_file_check()

subroutine control_all::run_file_check ( integer, intent(out) datn )

private

Check if mystop and datn exist else create.

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store_commit_hash()

subroutine control_all::store_commit_hash

private

Store the Git commit hash, modified files and.

Author

Emmanuel Lanti (based on A. Bottino's work)

Date

02/17

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store_input_file()

subroutine control_all::store_input_file

private

Store the input file in the current directory in the result file.

Author

Emmanuel Lanti

Date

02/17

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store_species_info()

subroutine control_all::store_species_info

private

Store information about species.

Author

Emmanuel Lanti

Date

11/17

Note

We suppose that the species won't change name during the simulation

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summarize_run()

subroutine control_all::summarize_run

private

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write_checkpoint()

subroutine control_all::write_checkpoint

private

Write files necessary for checkpoint.

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